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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCAAACAATCACACAACTGATGCTCCTGTTACAGACACAGGCTCAGCATCTGCTACAAGTAATGACAGCAAAAAAGTTTCACGGCAGGATATTGAGTTTgtaaggatatatattctttgctaaacctttgactagttttctgttattgcctacttttacgtgcacatcctatatcgtgtggattgtattttatagggatgatttttggaagctaatctgatctaatctgttttttttgcctttttgattaaatattctaacttttgtag

Basic information

species Glycine max
transcript GLYMA07G06230.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|308222668|gb|HO760643.1|HO760643
EST:     CTGCTACAAGTAATGACAGCAAAAAAGTTTCACGGCAGGATATTGAGTTT                         GTTCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAA
genomic: CTGCTACAAGTAATGACAGCAAAAAAGTTTCACGGCAGGATATTGAGTTTgtaaggatat ... acttttgtagGTTCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAA
EST: gi|192295880|gb|FG990904.1|FG990904
EST:     CTGCTACAAGTAATGACAGCAAAAAAGTTTCACGGCAGGATATTGAATTT                         GTCCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAA
genomic: CTGCTACAAGTAATGACAGCAAAAAAGTTTCACGGCAGGATATTGAGTTTgtaaggatat ... acttttgtagGTTCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAA
EST: gi|302141431|gb|HO212307.1|HO212307
EST:     CGGCAGGATATTGAGTTT                         GTTCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAA
genomic: CGGCAGGATATTGAGTTTgtaaggatat ... acttttgtagGTTCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAA