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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCATACCATTTACGGATGTTATTCAACAATTTGGAACTTGGTTAATGCGACATCAATTGTGGATGGGTGAGAAACTTATTCGTGCAGCATTTGTAACATGgtaaatatcattgcttatggtttaccatttatacctcttttcattttcttatttgtagtggtggattattttccttccctgtatatcttgaaatagaagaccagaatttgttcttttacatcaaaatcttttgctattgcag

Basic information

species Glycine max
transcript GLYMA06G35090.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7639174|gb|AW733502.1|AW733502
EST:     ATTCGTGCAGCATTTGTAACATG                         TGGAAATTGGGATTTGAAAACAAAGGTCCCTCAGCAATGTGAAGTGTCAAA
genomic: ATTCGTGCAGCATTTGTAACATGgtaaatatca ... gctattgcagTGGAAATTGGGATTTGAAAACAAAGGTCCCTCAGCAATGTGAAGTGTCAAA
EST: gi|10252655|gb|BE820421.1|BE820421
EST:     CATCAATTGTGGATGGGTGAGAAACTTATTCGTGCAGCATTTGTAACATG                         TGGAAATTGGGATTTGAAAACAAAGGTCCCTCAGCAATGTGAAGTGTCAAA
genomic: CATCAATTGTGGATGGGTGAGAAACTTATTCGTGCAGCATTTGTAACATGgtaaatatca ... gctattgcagTGGAAATTGGGATTTGAAAACAAAGGTCCCTCAGCAATGTGAAGTGTCAAA