1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TTTCCTACACCGTGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtctgctccttgtcttgttccttctagaggaggataggtgaattggtgggttttgaaaagagaagttttggtaatgtaaattgtaatatgctttggcggaatggtgaacag
species | Glycine max |
transcript | GLYMA06G19250.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTG GGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAAEST: gi|10253112|gb|BE820878.1|BE820878
genomic: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtc ... tggtgaacagGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
EST: AGTTGCACTGGCGTCTGTTACCGAGNNNNCTTTCAATTG GGCTNGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAAEST: gi|22522844|gb|BU081655.1|BU081655
genomic: AGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtc ... tggtgaacagGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
EST: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTG GGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAAEST: gi|51337755|gb|CO981621.1|CO981621
genomic: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtc ... tggtgaacagGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
EST: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTG GGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAAEST: gi|15204323|gb|BI427091.1|BI427091
genomic: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtc ... tggtgaacagGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
EST: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTG GGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAAEST: gi|17518865|gb|BM187907.1|BM187907
genomic: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtc ... tggtgaacagGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
EST: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTG GGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAAEST: gi|13311988|gb|BG405639.1|BG405639
genomic: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtc ... tggtgaacagGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
EST: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTG GGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
genomic: ATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtc ... tggtgaacagGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCCTACACCGTGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGgtgagatgtctgctccttgtcttgttccttctagaggaggataggtgaattggtgggttttgaaaagagaagttttggtaatgtaaattgtaatatgctttggcggaatggtgaacag
- - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - GTGGAG