1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTCCCTTTTTGCTCTTCATGGCAATTCCAGAAAGCTCTTCTGTGGCTTCGCTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGgtatgctaagtaattgtacttatagttgttgataagcagattttaacaattttatattttgttatatatattcactgttgatttttctataaattgttat...
species | Glycine max |
transcript | GLYMA06G12740.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATG AGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCGEST: gi|298165929|gb|HO008900.1|HO008900
genomic: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGgtatgctaag ... ctctgtgcagAGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCG
EST: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATG AGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCGEST: gi|209700763|gb|BW683046.1|BW683046
genomic: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGgtatgctaag ... ctctgtgcagAGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCG
EST: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATG AGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCGEST: gi|151413261|gb|EV283069.1|EV283069
genomic: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGgtatgctaag ... ctctgtgcagAGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCG
EST: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCA-TTATG AGACTAGTGATCAAA-CTA-GAGTGTG-AGT-CATGCCCTEST: gi|209700762|gb|BW683045.1|BW683045
genomic: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGgtatgctaag ... ctctgtgcagAGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCT
EST: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATG AGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTT
genomic: CTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGgtatgctaag ... ctctgtgcagAGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCCCTTTTTGCTCTTCATGGCAATTCCAGAAAGCTCTTCTGTGGCTTCGCTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGgtatgctaagtaattgtacttatagttgttgataagcagattttaacaattttatattttgttatatatattcactgttgatttttctataaattgttat
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