1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATTCAAGGATTTTCCATCTTCTTCATTACCTCTGATTGAAACTCTTCTTGCAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAAgtgagtgatcactgtggattagtatagtatttgagttcttatgtattaactcacgtattttctttctgcag
species | Glycine max |
transcript | GLYMA05G38410.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAA TTCTTTACCACTGAGCCCTATGCTTGTGAACCATCTAATTTACCAAAGTATEST: gi|10844674|gb|BF067900.1|BF067900
genomic: CAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAAgtgagtgatc ... ctttctgcagTTCTTTACCACTGAGCCCTATGCTTGTGAACCATCTAATTTACCAAAGTAT
EST: CAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAA TTCTTTACCACTGAGCCCTATGCTTGTGAACCATCTAATTTACCAAAGTATEST: gi|17153123|gb|BM143056.1|BM143056
genomic: CAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAAgtgagtgatc ... ctttctgcagTTCTTTACCACTGAGCCCTATGCTTGTGAACCATCTAATTTACCAAAGTAT
EST: CAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAA TTCTTTACCACTGAGCCCTATGCTTGTGAACCATCTAATTTACCAAAGTAT
genomic: CAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAAgtgagtgatc ... ctttctgcagTTCTTTACCACTGAGCCCTATGCTTGTGAACCATCTAATTTACCAAAGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCAAGGATTTTCCATCTTCTTCATTACCTCTGATTGAAACTCTTCTTGCAATAGATCCTGATGATCGTGGCACTACCTCGGCTGCTCTAAATAGTGAAgtgagtgatcactgtggattagtatagtatttgagttcttatgtattaactcacgtattttctttctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT