Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAGGAAGATGAGATGGGACGGAACATAAGGAAGACTAGGATTCAATTTTGGGATGATACATCAAAGCTTCAAGTAGATAAAGAGTGCAGCATTTGTCAGgtaagtttgcataatcgaattaaattgttacattgctttctctttttaatatgtgtttaaagattgaaaataatttatcttgcttttgggttcag

Basic information

species Glycine max
transcript GLYMA05G34270.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192297177|gb|FG988273.1|FG988273
EST:     GGGATGATACATCAAAGCTTCAAGTAGATAAAGAGTGCAGCATTTGTCAG                         GAGGAGTATGAAGCGGGTGATGAGTTGGGGAGGCTAAATTGTGAGCACAGT
genomic: GGGATGATACATCAAAGCTTCAAGTAGATAAAGAGTGCAGCATTTGTCAGgtaagtttgc ... ttgggttcagGAGGAGTATGAAGCGGGTGATGAGTTGGGGAGGCTAAATTGTGAGCACAGT
EST: gi|21888066|gb|BQ741279.1|BQ741279
EST:     GGGATGATACATCAAAGCTTCAAGTAGATAAAGAGTGCAGCATTTGTCAG                         GAGGAGTATGAAGCGGGTGATGAGTTGGGGAGGCTAAATTGTGAGCACAGT
genomic: GGGATGATACATCAAAGCTTCAAGTAGATAAAGAGTGCAGCATTTGTCAGgtaagtttgc ... ttgggttcagGAGGAGTATGAAGCGGGTGATGAGTTGGGGAGGCTAAATTGTGAGCACAGT