1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTATTGGAGACTCTTAGTAAGAATTGTGGTGAAAGTGTATTTCAGCAGATCATTGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGgtatttatttgttttgacactctatatttcatttttaatcttccttctgtaactgtattttggaaatggaagactttcttatccattgctgctttcttttaatgtaattgtacag
species | Glycine max |
transcript | GLYMA04G42250.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCATTGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAG CCGGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAAEST: gi|207848805|gb|GD818836.1|GD818836
genomic: TCATTGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGgtatttattt ... aattgtacagCCGGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAA
EST: NCATTGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAG CCGGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAA
genomic: TCATTGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGgtatttattt ... aattgtacagCCGGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATTGGAGACTCTTAGTAAGAATTGTGGTGAAAGTGTATTTCAGCAGATCATTGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGgtatttatttgttttgacactctatatttcatttttaatcttccttctgtaactgtattttggaaatggaagactttcttatccattgctgctttcttttaatgtaattgtacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG