1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GCCATCATACTATCTTCATGGACAGAGAATTTTGGGGATCCTTCAGAGAACAAGGACTTGCTTACCCAATTTAGGGGTGCTGCTGTGGCCATTGCTTCTGgtagatttcttaccttaaaatttatttttctcattttgatactgtaaatttgaactttgaaactttttatgcatgatgttaatctttttaacattttaca...
species | Glycine max |
transcript | GLYMA04G41090.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GCTGCTGTGGTCCATTGCTTCTG ATGAAAAAATAGCCTTGCTGGGTGCCATACAGTCTCTCTTTGAAGGTTCAAEST: gi|208175035|gb|GD970410.1|GD970410
genomic: GCTGCTGTGG-CCATTGCTTCTGgtagatttct ... tgtgcttcagATGAAAAAATAGCCTTGCTGGGTGCTATACAGTCTCTCTTTGAAGGTTCAA
EST: CAAGGACTTGCTTACCCAATTTAGGGGTGCTGCTGTGGCCATTGCTTCTG ATGAAAAAATAGCCTTGCTGGGTGCTATACAGTCTCTCTTTGAAGGTTCAA
genomic: CAAGGACTTGCTTACCCAATTTAGGGGTGCTGCTGTGGCCATTGCTTCTGgtagatttct ... tgtgcttcagATGAAAAAATAGCCTTGCTGGGTGCTATACAGTCTCTCTTTGAAGGTTCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCATCATACTATCTTCATGGACAGAGAATTTTGGGGATCCTTCAGAGAACAAGGACTTGCTTACCCAATTTAGGGGTGCTGCTGTGGCCATTGCTTCTGgtagatttcttaccttaaaatttatttttctcattttgatactgtaaatttgaactttgaaactttttatgcatgatgttaatctttttaacattttaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT