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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACGTTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCATgtaagtattattgtgttggattgcccacttactatttttgtcatcatgatttcagtagttactatatgcctttgactggtatccagttaagaactactgt...

Basic information

species Glycine max
transcript GLYMA04G36460.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254321447|gb|GR824764.1|GR824764
EST:     AACGTTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCAT                         GGAACTGCTGACGAGGTTGTTGATTGCTCTCATG-CA-GCAGTTGTGGGA
genomic: AACGTTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCATgtaagtatta ... ctctcttcagGGAACTGCTGACGAGGTTGTTGATTGCTCTCATGGCAAGCAGTTGTGGGA
EST: gi|17998797|gb|BI273649.1|BI273649
EST:     AACGTTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCAT                         GGAACTGCTGACGAGGTTGTTGATTGCTCTCATGGCAAGCAGTTGTGGGAG
genomic: AACGTTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCATgtaagtatta ... ctctcttcagGGAACTGCTGACGAGGTTGTTGATTGCTCTCATGGCAAGCAGTTGTGGGAG
EST: gi|193641366|gb|FK593200.1|FK593200
EST:     AACGTTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCAT                         GGAACTGCTGACGAGGTTGTTGATTGCTCTCATGGCAAGCAGTTGTGGGAG
genomic: AACGTTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCATgtaagtatta ... ctctcttcagGGAACTGCTGACGAGGTTGTTGATTGCTCTCATGGCAAGCAGTTGTGGGAG