1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGCTTACCAACTCTTATACCTGTTGGATGCTACTGGATACTACTCGCTAGCACTGCACGCACTTGGGATTCATGTTTGCCGAGCTACAGGGCAAGAGCTGgtacacaattagaaattaggatattgcattcagaaaaatcttcattttgtgttatttggaaaaaaaaaaaattggccatgcatttatacataatttttat...
species | Glycine max |
transcript | GLYMA03G41050.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CACTGCACGCACTTGGGATTCATGTTTGCCGAGCTACAGGGCAAGAGCTG ATGGATACCTCTTCTAGGATTTCAAAGATGCGTAACCGTGAACGTGAGAGGEST: gi|209710153|gb|BW658902.1|BW658902
genomic: CACTGCACGCACTTGGGATTCATGTTTGCCGAGCTACAGGGCAAGAGCTGgtacacaatt ... gtcaagatagATGGATACCTCTTCTAGGATTTCAAAGATGCGTAACCGTGAACGTGAGAGG
EST: CACTGCACGCACTTGGGATTCATGTTTGCCGAGCTACAGGGCAAGAGCTG ATGGATACCTCTTCTAGGATTTCNAAGATGCGTAACCGTGAACGTGAGAGG
genomic: CACTGCACGCACTTGGGATTCATGTTTGCCGAGCTACAGGGCAAGAGCTGgtacacaatt ... gtcaagatagATGGATACCTCTTCTAGGATTTCAAAGATGCGTAACCGTGAACGTGAGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTTACCAACTCTTATACCTGTTGGATGCTACTGGATACTACTCGCTAGCACTGCACGCACTTGGGATTCATGTTTGCCGAGCTACAGGGCAAGAGCTGgtacacaattagaaattaggatattgcattcagaaaaatcttcattttgtgttatttggaaaaaaaaaaaattggccatgcatttatacataatttttat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaaa