1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTCAAAACTATATTCCTTCCGACGGAAAAACCATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattttggcacttcccttatgtctctcagtttcttgtgagtttgcacaggaatttgtatcatgttcagcattcaaagagttgatatagtctccag...
species | Glycine max |
transcript | GLYMA03G38810.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CATTGACTCCGGAGGCATGTGCGCCATAGATTGCTATACTTACTATGGAG ATTCNGCGGACAATTGGCGATEST: gi|213596238|gb|DB960170.1|DB960170
genomic: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGACAATTGGCGAT
EST: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAG ATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAEST: gi|151402134|gb|EV271947.1|EV271947
genomic: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAA
EST: ATTGCTATACTTCCTTTGGAG ATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAEST: gi|151395479|gb|EV265356.1|EV265356
genomic: ATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAA
EST: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAG ATTAGGGGGATAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAEST: gi|10846293|gb|BF069216.1|BF069216
genomic: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAA
EST: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAG ATTAGGGGGACEST: gi|37997687|gb|CF809276.1|CF809276
genomic: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGAC
EST: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAG ATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAEST: gi|151407958|gb|EV277773.1|EV277773
genomic: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAA
EST: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAG ATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAEST: gi|15202616|gb|BI425495.1|BI425495
genomic: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAA
EST: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAG ATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAA
genomic: CATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattt ... taatttgcagATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCAAAACTATATTCCTTCCGACGGAAAAACCATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGgtcagaattttggcacttcccttatgtctctcagtttcttgtgagtttgcacaggaatttgtatcatgttcagcattcaaagagttgatatagtctccag
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