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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTTTGGTGACGAAATTCTTCTCGAAAATGGAGAAGTCAATAGACCTAGTCTTGGCCAAATTGTTTTCTCGGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataatttccctttcatttagttccatttgaattgatcattgaatttgctcttttgagtttgggttatgatgttgttttag

Basic information

species Glycine max
transcript GLYMA03G37050.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120494333|gb|EH222500.1|EH222500
EST:     CGTCAAGTTCTCAACCG                         ATTGCTGGCTCCTTACATATCACGTGGAATATTATGGGACAGTTTGAAGCT
genomic: CGTCAATTTCTCAACCGgtattcataa ... gttgttttagATTGCTGGCTCCTTACATATCACGTGGAATATTTTGGGACATTTTGAAGCT
EST: gi|58021974|gb|CX708715.1|CX708715
EST:     CTTGGCCAAATTGTTTTCTCGGATCCGGATAAGCGTCAATTTCTCAACCG                         ATTGCTGGCTCCTTACATATCACGTGGAATATTTTGGGACATTTTGAAGCT
genomic: CTTGGCCAAATTGTTTTCTCGGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataa ... gttgttttagATTGCTGGCTCCTTACATATCACGTGGAATATTTTGGGACATTTTGAAGCT
EST: gi|151401494|gb|EV271308.1|EV271308
EST:     CTTGGCCAAATTGTTTTCTCGGATCCGGATAAGCGTCAATTTCTCAACCG                         ATTGCTGGCTCCTTACATATCACGTGGAATATTTTGGGACATTTTGAAGCT
genomic: CTTGGCCAAATTGTTTTCTCGGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataa ... gttgttttagATTGCTGGCTCCTTACATATCACGTGGAATATTTTGGGACATTTTGAAGCT
EST: gi|151408301|gb|EV278109.1|EV278109
EST:     CTTGGCCAAATTGTTTTCTCGGATCCGGATAAGCGTCAATTTCTCAACCG                         ATTGCTGGCTCCTTACATATCACGTGGAATATTTTGGGACATTTTGAAGCT
genomic: CTTGGCCAAATTGTTTTCTCGGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataa ... gttgttttagATTGCTGGCTCCTTACATATCACGTGGAATATTTTGGGACATTTTGAAGCT