Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTGACAGTGGGGAAATTTTCAATGGAGAAAATTTTCTAGGGTCCTGCAGCCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaatcacaaatgctgctattagcactgactcgatctttttcttattttcaaaaatgattaaactccattttggtggtaaatgcag

Basic information

species Glycine max
transcript GLYMA03G31340.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208264835|gb|GE062167.1|GE062167
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193665814|gb|FK612993.1|FK612993
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207776619|gb|GD748681.1|GD748681
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAA-G                         GTGATCTTCACTGGAAAAT-GTGTCTGTTTANATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193628958|gb|FK576408.1|FK576408
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208214526|gb|GE012871.1|GE012871
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193431175|gb|FK398587.1|FK398587
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193590831|gb|FK548176.1|FK548176
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193639006|gb|FK586017.1|FK586017
EST:     AGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: AGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193532454|gb|FK491476.1|FK491476
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207680614|gb|GD662748.1|GD662748
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193569963|gb|FK526714.1|FK526714
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGA-CTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207819394|gb|GD791190.1|GD791190
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAAT
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAAT
EST: gi|193682345|gb|FK624143.1|FK624143
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193530081|gb|FK486140.1|FK486140
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193484819|gb|FK452071.1|FK452071
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGG
EST: gi|207826240|gb|GD799071.1|GD799071
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208129385|gb|GD930981.1|GD930981
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTAGGAAAAATAAGTGTCTGTTTATATA
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACT-GGAAAA-TA-GTGTCTGTTTATATA
EST: gi|193680688|gb|FK621164.1|FK621164
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193674504|gb|FK619962.1|FK619962
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193726825|gb|FK656903.1|FK656903
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193397751|gb|FK363729.1|FK363729
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208205432|gb|GE008335.1|GE008335
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATAGACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207713581|gb|GD695256.1|GD695256
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193642053|gb|FK593663.1|FK593663
EST:     AGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: AGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193487608|gb|FK449719.1|FK449719
EST:     CACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193335624|gb|FK301850.1|FK301850
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193689324|gb|FK630457.1|FK630457
EST:     CCTAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193578827|gb|FK536675.1|FK536675
EST:     ACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: ACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193677566|gb|FK616168.1|FK616168
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208092117|gb|GD890988.1|GD890988
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207707758|gb|GD688153.1|GD688153
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193567918|gb|FK526509.1|FK526509
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACT
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACT
EST: gi|207821854|gb|GD794293.1|GD794293
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAA-TAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208311149|gb|GE108525.1|GE108525
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208304818|gb|GE106159.1|GE106159
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207791987|gb|GD765993.1|GD765993
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATGTACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207740966|gb|GD714344.1|GD714344
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208151452|gb|GD950377.1|GD950377
EST:     TCAAGAGCTACTTGCTAAGGGCAGTGAATTACTTAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAGG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAGG
EST: gi|193387603|gb|FK350920.1|FK350920
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208087921|gb|GD891077.1|GD891077
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193556208|gb|FK514777.1|FK514777
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208149642|gb|GD948206.1|GD948206
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208206815|gb|GE002536.1|GE002536
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208220718|gb|GE016748.1|GE016748
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193710288|gb|FK645520.1|FK645520
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193542571|gb|FK501036.1|FK501036
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208306412|gb|GE108327.1|GE108327
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193530006|gb|FK487437.1|FK487437
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAA-G                         GTGATCTTCACT
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACT
EST: gi|193607866|gb|FK557549.1|FK557549
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207791860|gb|GD764999.1|GD764999
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208328005|gb|GE121197.1|GE121197
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193631087|gb|FK584556.1|FK584556
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207784474|gb|GD757329.1|GD757329
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208197041|gb|GD995868.1|GD995868
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193494765|gb|FK463593.1|FK463593
EST:     AGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: AGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207786914|gb|GD755821.1|GD755821
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAGG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAGG
EST: gi|193484532|gb|FK451616.1|FK451616
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208260372|gb|GE058498.1|GE058498
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208312003|gb|GE109855.1|GE109855
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193447792|gb|FK411397.1|FK411397
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207787136|gb|GD758717.1|GD758717
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208288992|gb|GE085369.1|GE085369
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193405014|gb|FK373385.1|FK373385
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208293996|gb|GE090791.1|GE090791
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193656719|gb|FK603751.1|FK603751
EST:     CAAGAGCTTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATTTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CAAGAGCT-ACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208243116|gb|GE040266.1|GE040266
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193338799|gb|FK303110.1|FK303110
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208057371|gb|GD849912.1|GD849912
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAA-TAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|207796418|gb|GD769754.1|GD769754
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCC
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCC
EST: gi|193525921|gb|FK478906.1|FK478906
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208297340|gb|GE094431.1|GE094431
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193560982|gb|FK519365.1|FK519365
EST:     CAAGAGCTACTTGCTAAGGGCAAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CAAGAGCTACTTGCTAAGGGC-AGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193390807|gb|FK355971.1|FK355971
EST:     CCAAGAGCTACTTGCTAAGGGCGGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATA
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATA
EST: gi|208136048|gb|GD935857.1|GD935857
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAA-TAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193373899|gb|FK339817.1|FK339817
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208266065|gb|GE063574.1|GE063574
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193538688|gb|FK495964.1|FK495964
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208054217|gb|GD854410.1|GD854410
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGC-AG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193639885|gb|FK593994.1|FK593994
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|208191270|gb|GD991988.1|GD991988
EST:     TGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: TGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193730605|gb|FK665775.1|FK665775
EST:     CCAAGAGC-ACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
EST: gi|193695684|gb|FK633456.1|FK633456
EST:     CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAG                         GTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG
genomic: CCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaa ... gtaaatgcagGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGTGACAGTGGGGAAATTTTCAATGGAGAAAATTTTCTAGGGTCCTGCAGCCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGgtagtatcaatcacaaatgctgctattagcactgactcgatctttttcttattttcaaaaatgattaaactccattttggtggtaaatgcag

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