1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATCCGATGTTTAATCAAATGAAATCAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAGgtaatttcttatcttatttatgtgcttatgtgcttccaagaatcaataggtaacaacatataatgtattccaacatttcacactcttctcttacatgtaagatgcagtcaattgcaacatcggatataaacctctctgctgctattgctgcatctcag
species | Glycine max |
transcript | GLYMA03G28320.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAG GCACTGGTATTCCAAAAAGATTCGCAACCAACTCTGGCTTCGACATCTGCTEST: gi|120530210|gb|EH258344.1|EH258344
genomic: CAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAGgtaatttctt ... tgcatctcagGCACTGGTATTCCAAAAAGATTCGCAACCAACTCTGGCTTCGACATCTGCT
EST: CAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAG GCACTGGTATTCCAAAAAGATTCGCAACCAACTCTGGCTTCGACATCTGCT
genomic: CAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAGgtaatttctt ... tgcatctcagGCACTGGTATTCCAAAAAGATTCGCAACCAACTCTGGCTTCGACATCTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCCGATGTTTAATCAAATGAAATCAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAGgtaatttcttatcttatttatgtgcttatgtgcttccaagaatcaataggtaacaacatataatgtattccaacatttcacactcttctcttacatgtaagatgcagtcaattgcaacatcggatataaacctctctgctgctattgctgcatctcag
- - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - GCTGAT