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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGGTGGTATGGTGTCATTGGTCATTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaattcacttttacattgaattgtaacttgtagtaaacagaattaaacagcttttcttatatttttctgaagttcaaatcaagggtataataga...

Basic information

species Glycine max
transcript GLYMA03G28210.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14259166|gb|BG882074.1|BG882074
EST:     TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATG                         ATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
genomic: TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaat ... ctgacaacagATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
EST: gi|192306508|gb|FG997206.1|FG997206
EST:     TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATG                         ATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
genomic: TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaat ... ctgacaacagATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
EST: gi|58024860|gb|CX711601.1|CX711601
EST:     TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATG                         ATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
genomic: TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaat ... ctgacaacagATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
EST: gi|11275131|gb|BF325454.1|BF325454
EST:     TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATG                         ATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
genomic: TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaat ... ctgacaacagATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
EST: gi|9204813|gb|BE331037.1|BE331037
EST:     TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATG                         ATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
genomic: TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaat ... ctgacaacagATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
EST: gi|11274180|gb|BF324548.1|BF324548
EST:     TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATG                         ATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
genomic: TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaat ... ctgacaacagATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
EST: gi|192306507|gb|FG997205.1|FG997205
EST:     TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATG                         ATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC
genomic: TTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGgtaagagaat ... ctgacaacagATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGAC