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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCTGAAAACAACACTGATTCTGGTGAAAAGGATTGGTTCAAGGGTTCTGTTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGgcaagtaattaagtgtttaattcaaacagtggggaaagagtaccttacctactactactactactttgattcttattcatgagagtgacttgtgtacattatttatgattaatgcag

Basic information

species Glycine max
transcript GLYMA03G27760.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6455237|gb|AW185920.1|AW185920
EST:     TTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAG                         GCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG
genomic: TTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGgcaagtaatt ... attaatgcagGCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG
EST: gi|298199289|gb|HO042652.1|HO042652
EST:     TCCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAG                         GCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG
genomic: TTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGgcaagtaatt ... attaatgcagGCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG
EST: gi|254320171|gb|GR829359.1|GR829359
EST:     TTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAG                         GCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG
genomic: TTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGgcaagtaatt ... attaatgcagGCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG
EST: gi|151396846|gb|EV266719.1|EV266719
EST:     TTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAG                         GCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG
genomic: TTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGgcaagtaatt ... attaatgcagGCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTG