Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGTGGTGCATTCTTTAAAGGTTTCCTTGGAGGACGTTTATAATGGCACAACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggacttctatttatgtttatattttttgtacgtctaattttttttagagaggtttagcctttaatccgattactttaacttttccaaaatatgtat...

Basic information

species Glycine max
transcript GLYMA03G27030.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G27030.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv15s0021g02090.t01 (Vitis vinifera), 5'ss of exon 4
ATGTGGTGCATTCTTTAAAGGTTTCCTTGGAGGACGTTTATAATGGCACAACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggacttctattta--tgtttatattttttgtacgtctaattttttttagagaggtttagcctttaatccgattactttaacttttccaaaatatgtat
|||| |||||| |||| |||||||| ||||||||| | |||||||||||| |||||||| ||||||| || || ||  |  | ||||||||||||||||||||||  ||     |||  | || ||| | ||    ||| | ||  ||     ||   | |   |  |     |||      ||  |||  || ||  ||| 
ATGTTGTGCATACTTTGAAGGTTTCTTTGGAGGACTTGTATAATGGCACATCAAAGAAATTATCTCTATCAAGGAATGTTATGTGCCCAAAATGTAAAGGgtatgtcctctatgttagcttttcatagtattgactcgtattatccttggct-agtcatgtgatcaattgattgatagaaccaaggtttgaaatatcggta-
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26045969|gb|CA783365.1|CA783365
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|21678081|gb|BQ630432.1|BQ630432
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|24135816|gb|BU926326.1|BU926326
EST:     AAAGAAACTATCTCTTTCTAGAAACATATTATGGCCCAAA-TGTTACAGG                         AAAAGGT-CAAAAAGTGGAACTGCT
genomic: AAAGAAACTATCTCTTTCTAGAAACATATTATG-CCCAAAATGTAA-AGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCT
EST: gi|7588764|gb|AW704552.1|AW704552
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|26058056|gb|CA800970.1|CA800970
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|18040422|gb|BM308716.1|BM308716
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGA
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGA
EST: gi|254323522|gb|GR835968.1|GR835968
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|9819348|gb|BE554861.1|BE554861
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|24136970|gb|BU927480.1|BU927480
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGGTTCAAAA-GTGGAACTGCTGG
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGG-TTCAAAAAGTGGAACTGCTGG
EST: gi|254335361|gb|GR846858.1|GR846858
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|19345767|gb|BM890647.1|BM890647
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|19452608|gb|BM954018.1|BM954018
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254319865|gb|GR830889.1|GR830889
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAG-TGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|42722495|gb|CK768394.1|CK768394
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254331143|gb|GR843262.1|GR843262
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAG-TGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254348976|gb|GR860248.1|GR860248
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|14258951|gb|BG881859.1|BG881859
EST:     ACAAATAAACTATCTCTTTCTACAAACATATTATGCCCAAAATGTTAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAACGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|19347132|gb|BM892012.1|BM892012
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|13791552|gb|BG654143.1|BG654143
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|19453462|gb|BM954872.1|BM954872
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|7685781|gb|AW756429.1|AW756429
EST:     ACCAAGAAACTATCTCTTTCTAGAAACATATTATGCCCCAAATGTAAAGG                         GAAAGGTTCAAANAGTGGAACTGCTGGTAGGTGTTTTGGGATGCAAAG-CA
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGG-ATGCAAAGGCA
EST: gi|213599223|gb|DB962274.1|DB962274
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GGAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|207699602|gb|GD678901.1|GD678901
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|18690716|gb|BM519564.1|BM519564
EST:     ACAAAGAGACTATCTCTTTCTAGAAACATATTATGCCCAAGATGTAGAGG                         GACAGGTTCAAAAAGTGGAACTGCT
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCT
EST: gi|16997284|gb|BM086656.1|BM086656
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTG
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTG
EST: gi|10843388|gb|BF066687.1|BF066687
EST:     ACAAAGAAACTATCTCTTTCTACAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254344879|gb|GR851362.1|GR851362
EST:     AAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: AAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|15201211|gb|BI424752.1|BI424752
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAA
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAA
EST: gi|24137042|gb|BU927552.1|BU927552
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|23727594|gb|BU761832.1|BU761832
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTANGTGTTTTGGA
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGA
EST: gi|16996576|gb|BM085948.1|BM085948
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGG
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGG
EST: gi|19453406|gb|BM954816.1|BM954816
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAA
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAA
EST: gi|16106237|gb|BI893977.1|BI893977
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254347759|gb|GR854008.1|GR854008
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|19936712|gb|BQ080984.1|BQ080984
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|7589228|gb|AW705006.1|AW705006
EST:     AGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: AGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|7588445|gb|AW704302.1|AW704302
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254321258|gb|GR827707.1|GR827707
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|213596853|gb|DB958061.1|DB958061
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGT
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGT
EST: gi|254317647|gb|GR826631.1|GR826631
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|19452755|gb|BM954165.1|BM954165
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254319441|gb|GR830692.1|GR830692
EST:     GCAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|254328558|gb|GR832930.1|GR832930
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|17964558|gb|BM271291.1|BM271291
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGTGTTTTGGATGCAAAGGCAC
EST: gi|207756348|gb|GD729529.1|GD729529
EST:     ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGG                         GAAAGGTTCAAAAAGTGGAACTGCTGGTAGGT
genomic: ACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggactt ... gataaatcagGAAAGGTTCAAAAAGTGGAACTGCTGGTAGGT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATGTGGTGCATTCTTTAAAGGTTTCCTTGGAGGACGTTTATAATGGCACAACAAAGAAACTATCTCTTTCTAGAAACATATTATGCCCAAAATGTAAAGGgtatggacttctatttatgtttatattttttgtacgtctaattttttttagagaggtttagcctttaatccgattactttaacttttccaaaatatgtat

- - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAA