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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCCTTTCAAAGAAGACTCGTATAATATTTCTCAGTTCCCCTCCCATCAATGAGGTGCAAATGCATGAAACTCTCAGgttctgactacaattcattttggttattgtatataacttcacattatcttgaggctatgatagtgatgcctgcacttctatttttttattaagaccttgc...

Basic information

species Glycine max
transcript GLYMA03G07880.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5510105|gb|AI856489.1|AI856489
EST:     CTCAGTTCCCCTCCCATCAATGAGGTGCAAATGCATGAAACTCTCAG                         TGATCTATTGGGGCCACTAAGAAGGACAAATGAAGCTTGTCGAACATACTC
genomic: CTCAGTTCCCCTCCCATCAATGAGGTGCAAATGCATGAAACTCTCAGgttctgacta ... ctgaatccagTGATCTATTGGGGCCACTAAGAAGGACAAATGAAGCTTGTCGAACATACTC
EST: gi|5510115|gb|AI856499.1|AI856499
EST:     TTCCCCTCCCATCAATGAGGTGCAAATGCATGAAACTCTCAG                         TGATCTATTGGGGCCACTAAGAAGGACAAATGAAGCTTGTCGACCATACTC
genomic: TTCCCCTCCCATCAATGAGGTGCAAATGCATGAAACTCTCAGgttctgacta ... ctgaatccagTGATCTATTGGGGCCACTAAGAAGGACAAATGAAGCTTGTCGAACATACTC