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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGAGGTTCTTGGATCTGTTAGTGCCAATGATGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATGgtagtaaacttcattcttatttcctttcatcccataggttacatacttgtctggtagtttatgccatcttgagttattttctgttatcggagacatgagaatgttgtgaacttgcaaattgcag

Basic information

species Glycine max
transcript GLYMA03G01210.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213607288|gb|DB967053.1|DB967053
EST:     TGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATG                         GTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAG
genomic: TGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATGgtagtaaact ... caaattgcagGTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAG
EST: gi|209714420|gb|BW659104.1|BW659104
EST:     TGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATG                         GTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAG
genomic: TGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATGgtagtaaact ... caaattgcagGTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAG
EST: gi|15662349|gb|BI699720.1|BI699720
EST:     TGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATG                         GTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAG
genomic: TGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATGgtagtaaact ... caaattgcagGTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAG