1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GAACCTTAATGATGTTTCACCTGCAGTTGATGAGTCTGATTTGTCCCTGAAGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAGgtaattctgttataatgttcaataatgtgtcagtttgtcattaatttggaaaattccatttgatttcattcacaaaacagctcattgagagttttgttgcattgccttgtttggcag
species | Glycine max |
transcript | GLYMA02G46450.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAG AGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTAEST: gi|151397195|gb|EV267068.1|EV267068
genomic: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAGgtaattctgt ... tgtttggcagAGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTA
EST: TGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAG AGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTAEST: gi|208301779|gb|GE099009.1|GE099009
genomic: TGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAGgtaattctgt ... tgtttggcagAGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTA
EST: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAG AGCGAGAGGTTGCACAAGGTTCCTGAATTTGTGAGTACGGTGCATGATCTAEST: gi|193712473|gb|FK649636.1|FK649636
genomic: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAGgtaattctgt ... tgtttggcagAGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTA
EST: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAG AGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTAEST: gi|193607364|gb|FK558251.1|FK558251
genomic: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAGgtaattctgt ... tgtttggcagAGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTA
EST: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAG AGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTA
genomic: AGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAGgtaattctgt ... tgtttggcagAGCGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACGGTGCATGATCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACCTTAATGATGTTTCACCTGCAGTTGATGAGTCTGATTTGTCCCTGAAGAAGTTGGATGAATATCAATCCGAGCTCCAAGAACTTCAAAAGGAAAAGgtaattctgttataatgttcaataatgtgtcagtttgtcattaatttggaaaattccatttgatttcattcacaaaacagctcattgagagttttgttgcattgccttgtttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA