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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTAGTTTCTTTGGCTCAATCTGGGCACTCAATAACACCCGATCTGCTGACTAGTGATGgtaagatatgtatgtttaggtttgtcttctattaatttgtttgcataacttcttataattgtagcacattcttgtagctgtacctgcttacatattttgatttgattgtcaatgtcttcttatagatttaatctaatggaagcttaacttttatttcag

Basic information

species Glycine max
transcript GLYMA02G46350.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26058204|gb|CA801118.1|CA801118
EST:     TTTGGCTCAATCTGGGCGCTCAATAACACCCGATCTGCTGACTAGTGATG                         TTGATTTTACAAATGGGAAACCTCCCTCAATGGAGGGTTTGGACGTATTAC
genomic: TTTGGCTCAATCTGGGCACTCAATAACACCCGATCTGCTGACTAGTGATGgtaagatatg ... tttatttcagTTGATTTTACAAATGGAAAACCTCCCTCAATGGAGGGTTTGGACGTATTAC
EST: gi|213610862|gb|DB963192.1|DB963192
EST:     TTTGGCTCAATCTGGGCGCTCAATAACACCCGATCTGCTGACTAGTGATG                         TTGATTTTACAAATGGGAAACCTCCCTCAATGGAGGGTTTGGACGTATTAC
genomic: TTTGGCTCAATCTGGGCACTCAATAACACCCGATCTGCTGACTAGTGATGgtaagatatg ... tttatttcagTTGATTTTACAAATGGAAAACCTCCCTCAATGGAGGGTTTGGACGTATTAC
EST: gi|193396717|gb|FK362289.1|FK362289
EST:     TTTGGCTCAATCTGGGCACTCAATAACACCCGATCTGCTGACTAGTGATG                         TTGATTTTACAAATGGAAAACCT
genomic: TTTGGCTCAATCTGGGCACTCAATAACACCCGATCTGCTGACTAGTGATGgtaagatatg ... tttatttcagTTGATTTTACAAATGGAAAACCT
EST: gi|213591385|gb|DB959899.1|DB959899
EST:     TTTGGCTCAATCTGGGCGCTCAATAACACCCGATCTGCTGACTAGTGATG                         TTGATTTTACAAATGGGAAACCTCCCTCAATGGAGGGTTTGGACGTATTAC
genomic: TTTGGCTCAATCTGGGCACTCAATAACACCCGATCTGCTGACTAGTGATGgtaagatatg ... tttatttcagTTGATTTTACAAATGGAAAACCTCCCTCAATGGAGGGTTTGGACGTATTAC