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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCGTTGTACTTGGTGTTTTGCTCAAATCTATATTCTGACAACCAGTTGTCCGAACTTATTACATTTCGAAGCTCTTCATCATCTACCTTTGCTCTGGGGgtaagaatgatgtgaactcttttcaatttgtttcccttttgtcttcctaggtcacctttatgataaacaataatgaataaccacatatagttgtctctct...

Basic information

species Glycine max
transcript GLYMA02G45240.3
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254341759|gb|GR852896.1|GR852896
EST:     CCGAACTTATTACATTTCGAAGCTCTTCATCATCTACCTTTGCTCTGGGG                         GTGTCTGTCGGTTACTTCATCGCTGACCTTGGGATGATATTTTGGGTTTTT
genomic: CCGAACTTATTACATTTCGAAGCTCTTCATCATCTACCTTTGCTCTGGGGgtaagaatga ... aatgtgacagGTGTCTGTCGGTTACTTCATCGCTGACCTTGGGATGATATTTTGG-TTTTT
EST: gi|254325458|gb|GR838339.1|GR838339
EST:     CCGAACTTATTACATTTCGAAGCTCTTCATCATCTACCTTTGCTCTGGGG                         GGTGTCTGTCGGTTACTTCATCGCTGACCTTGGGATGATATTTTGGGTTTT
genomic: CCGAACTTATTACATTTCGAAGCTCTTCATCATCTACCTTTGCTCTGGGGgtaagaatga ... aatgtgacagG-TGTCTGTCGGTTACTTCATCGCTGACCTTGGGATGATATTTTGG-TTTT
EST: gi|254325459|gb|GR838340.1|GR838340
EST:     CCGAACTTATTACATTTCGAAGCTCTTCATCATCTACCTTTGCTCTGGGG                         GTGTCTGTCGGTTACTTCATCGCTGACCTTGGGATGATATTTTGGTTTTTT
genomic: CCGAACTTATTACATTTCGAAGCTCTTCATCATCTACCTTTGCTCTGGGGgtaagaatga ... aatgtgacagGTGTCTGTCGGTTACTTCATCGCTGACCTTGGGATGATATTTTGGTTTTTT