1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTGTAAATTTGGTGCATCCTGTAAATTCCACCATCCAAAAAATGGAGGTGGATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCGgtatgataatgacacttcttgttgctcttcttctgcctcgtgtaattgacagcaaatgatgcaatgttaaaacatgccttttgtttaaacag
species | Glycine max |
transcript | GLYMA02G17260.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCG GGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGTEST: gi|254331741|gb|GR843591.1|GR843591
genomic: GATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCGgtatgataat ... gtttaaacagGGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGT
EST: GATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCG GGTGAGAAAGA-TGCTCCTACTATT-GAAA-CGGGGCAGTGCAAATTTGGTEST: gi|208245673|gb|GE047457.1|GE047457
genomic: GATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCGgtatgataat ... gtttaaacagGGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGT
EST: GATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCG GGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGT
genomic: GATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCGgtatgataat ... gtttaaacagGGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTAAATTTGGTGCATCCTGTAAATTCCACCATCCAAAAAATGGAGGTGGATATTTAAGCCAAGCTCCACTAAATGTTTACGGATACCCGTTACGGCCGgtatgataatgacacttcttgttgctcttcttctgcctcgtgtaattgacagcaaatgatgcaatgttaaaacatgccttttgtttaaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT