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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCCAATGACTGTTGCGATGCACGATGCTCCAGTGAAAGACATTGCATGGATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAAgtatgcatcttgattcttatttttttaattttatttttatgtttacagtgtaaaaggggtttagtgatgttgtgttactggtaaaagtgtgaattaagag...

Basic information

species Glycine max
transcript GLYMA02G13780.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193485012|gb|FK449450.1|FK449450
EST:     ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAA                         GTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTT
genomic: ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAAgtatgcatct ... tttattttagGTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTT
EST: gi|37996246|gb|CF807835.1|CF807835
EST:     ATACCAGAGATGAATCTTTTAGCCACGGGAAGCTGGGACAAGACCCTGAA                         GTATTGGGATACTCGGCAGTCAAATCCAGTGCATACT
genomic: ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAAgtatgcatct ... tttattttagGTATTGGGATACTCGGCAGTCAAATCCAGTGCATACT
EST: gi|151398315|gb|EV268186.1|EV268186
EST:     ATATCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAA                         GTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTTCCTGA
genomic: ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAAgtatgcatct ... tttattttagGTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTTCCTGA
EST: gi|58015403|gb|CX702145.1|CX702145
EST:     ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGANCCTGAA                         GTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTTCCTGA
genomic: ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAAgtatgcatct ... tttattttagGTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTTCCTGA
EST: gi|10232293|gb|BE801181.1|BE801181
EST:     ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAA                         GTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTTCCTGA
genomic: ATACCAGAAATGAATCTTTTAGCCACGGGAAGTTGGGACAAGACCCTGAAgtatgcatct ... tttattttagGTATTGGGATACTCGGCAGTCAAATCCAGTGCATACTCAACAACTTCCTGA