1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCCAGGATGAATCACCCAAAGGGGATAGCGGTTGATAACCGAGGAAATATCTATATTGCAGATATAATGAATATGGCAATTAGGAAAATTAGTGATTCAGgcaagcattatgttatactctgagcaatcctttgtcctcctcagtcctctcccccataagacttcttttctacttctcacattagaatcgtaaattggagccttttatttagttaaggtttctgttttcag
species | Glycine max |
transcript | GLYMA02G03810.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTATATTGCAGATATAATGAATATGGCAATTAGGAAAATTAGTGATTCAG GGGTCACAACAATTGCEST: gi|12773827|gb|BG238754.1|BG238754
genomic: CTATATTGCAGATATAATGAATATGGCAATTAGGAAAATTAGTGATTCAGgcaagcatta ... ctgttttcagGGGTCACAACAATTGC
EST: CTATATTGCAGATATAATGAATATGGCAATTAGGAAAATTAGTGATTCAG GGGTCACAACAATTGCTGGCGGAAAATGGAGCCGGGGAGGGGGCCATATTG
genomic: CTATATTGCAGATATAATGAATATGGCAATTAGGAAAATTAGTGATTCAGgcaagcatta ... ctgttttcagGGGTCACAACAATTGCTGGCGGAAAATGGAGCCGGGGAGGGGGCCATATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCAGGATGAATCACCCAAAGGGGATAGCGGTTGATAACCGAGGAAATATCTATATTGCAGATATAATGAATATGGCAATTAGGAAAATTAGTGATTCAGgcaagcattatgttatactctgagcaatcctttgtcctcctcagtcctctcccccataagacttcttttctacttctcacattagaatcgtaaattggagccttttatttagttaaggtttctgttttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT