1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTATGAAGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttgagcttttgaaaccttgtgctttaatttcttgaaggtgaaggcattgtgatattaacatgtttgtgtaacttctgagggaatgtattatct...
species | Glycine max |
transcript | GLYMA02G01750.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAG ----G-----A--A-CAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGEST: gi|163921267|gb|EH038909.1|EH038909
genomic: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tgactatgagATTTGCTCGCAGGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAG
EST: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATAC----GGA- A---G---G-AGGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAG
genomic: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tgactatgagATTTGCTCGCAGGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGAAGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttgagcttttgaaaccttgtgctttaatttcttgaaggtgaaggcattgtgatattaacatgtttgtgtaacttctgagggaatgtattatct
- - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG