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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTCTTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACATgtaagttacttatagatattcaaagtccttacccataacatatccaatattgtccttccataatatctaacttttctaagatgtatcactgctttttcaaatgtctcaggatagtccttcttttggtttaggatttctatacttatttttcctctctgattccag

Basic information

species Glycine max
transcript GLYMA02G00750.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213590906|gb|DB973717.1|DB973717
EST:     TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACAT                         GAGTTCCCTCCTCTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT
genomic: TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACATgtaagttact ... ctgattccagGAGTTCCCTCCACTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT
EST: gi|6566941|gb|AW234572.1|AW234572
EST:     TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACAT                         GAGTTCCCTCCTCTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT
genomic: TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACATgtaagttact ... ctgattccagGAGTTCCCTCCACTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT
EST: gi|254328397|gb|GR835362.1|GR835362
EST:     TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACAT                         GAGTTCCCTCCACTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT
genomic: TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACATgtaagttact ... ctgattccagGAGTTCCCTCCACTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT
EST: gi|192301309|gb|FG989014.1|FG989014
EST:     TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACAT                         GAGTTCCCTCCACTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT
genomic: TTAAACAGTCTGCATCAGATTATGTGAAAGGATTTGATCAGTCATTACATgtaagttact ... ctgattccagGAGTTCCCTCCACTAGATCAATTGAAGCAGCAGTTTTCTGATAAAGTTCAT