1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGGTGCTGAGTTAAGTTTTTTTAATAAACTTGGACATGTAGAGAAAGTGGAGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttcccagacatagcatagatttcttatatcatgttctgttactcgttcagaaaggtaacacgagttctataggcaaaatgtgacaagtgcacagc...
species | Glycine max |
transcript | GLYMA01G43520.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|208325146|gb|GE124022.1|GE124022
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: TGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|192320651|gb|FK012733.1|FK012733
genomic: TGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|209697093|gb|BW667085.1|BW667085
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|207825073|gb|GD797233.1|GD797233
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: TCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|208138492|gb|GD935152.1|GD935152
genomic: TCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGTGCTGAGTTAAGTTTTTTTAATAAACTTGGACATGTAGAGAAAGTGGAGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttcccagacatagcatagatttcttatatcatgttctgttactcgttcagaaaggtaacacgagttctataggcaaaatgtgacaagtgcacagc
- - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG