Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAATTGGGGTTGCCCGTGATTGAAAAGGCTGGAGTGGCTCACAAGATTGACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcagtgattccatcttatatgtgtatttaatgttattagcttgaaattaatggctttgattgattcattgtgcag

Basic information

species Glycine max
transcript GLYMA01G39460.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192329697|gb|FK022949.1|FK022949
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|213590575|gb|DB973320.1|DB973320
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAANAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|7587911|gb|AW703717.1|AW703717
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|37995278|gb|CF806867.1|CF806867
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192302885|gb|FG998567.1|FG998567
EST:     GCTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|37995460|gb|CF807049.1|CF807049
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254334128|gb|GR849046.1|GR849046
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|6719430|gb|AW307077.1|AW307077
EST:     CTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: CTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|193535521|gb|FK492149.1|FK492149
EST:     GTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: GTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254344201|gb|GR855286.1|GR855286
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192319030|gb|FK006870.1|FK006870
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAAAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192302884|gb|FG998566.1|FG998566
EST:     GCTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254341478|gb|GR850691.1|GR850691
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254341479|gb|GR850692.1|GR850692
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|18734824|gb|BM528407.1|BM528407
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|15203964|gb|BI426741.1|BI426741
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192319031|gb|FK006871.1|FK006871
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAAAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254336450|gb|GR842629.1|GR842629
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192312912|gb|FK004054.1|FK004054
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAAAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254334127|gb|GR849045.1|GR849045
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|7591460|gb|AW707192.1|AW707192
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTANAGAC                         GAANAGAATAACGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192312913|gb|FK004055.1|FK004055
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAAAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|298174983|gb|HO017978.1|HO017978
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAGTAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254317284|gb|GR826229.1|GR826229
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|8401787|gb|BE057421.1|BE057421
EST:     TCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: TCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192299316|gb|FG990741.1|FG990741
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254336451|gb|GR842630.1|GR842630
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|209697719|gb|BW655620.1|BW655620
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192294842|gb|FG987531.1|FG987531
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGACTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|37996206|gb|CF807795.1|CF807795
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|13252345|gb|BG363248.1|BG363248
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCT
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCT
EST: gi|254317493|gb|GR826477.1|GR826477
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|192298656|gb|FG988567.1|FG988567
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|254344202|gb|GR855287.1|GR855287
EST:     ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: ACTTCAGAGAAGGACCCGCTCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
EST: gi|8283955|gb|BE021514.1|BE021514
EST:     TCTTCCTCTTCTTGACGTTCTCATTAAAGAC                         GAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC
genomic: TCTTCCTCTTCTTGACGTTCTCATTAAAGACgtgcgttcag ... cattgtgcagGAAAAGAATAAGGGAGCTTTCGATTTCATCTATGTGGATGCTGATAAGGAC