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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAATACTCATGTATCGACTCGTGTCATGGGAACTTTCGGgtaatttttcatcaccatattcttttattctctgtaggaacttcaataaagaaatgtgataattaaaaatcaaagggattttgctcatgatatgcatgttaacacag

Basic information

species Glycine max
transcript GLYMA01G38110.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G38110.1 (Glycine max), 5'ss of exon 4
lower sequence: AT2G18470.1 (Arabidopsis thaliana), 5'ss of exon 6
GTTGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAATACTCATGTATCGACTCGTGTCATGGGAACTTTCGGgtaatttttcatcaccatattcttttattctctgtaggaacttcaataaagaaatgtgataattaaaaatcaaagggattttgctcatgatatgcatgttaacacag
|| |||||||||||||| |||||||| ||  ||||||| || ||||||||||| |||||||| ||||||||||||||||||   ||  | ||| |||  |   ||| |  ||        || | ||||||  | |   ||  | |  ||     |||   || |   |   |  |    |   
GTGGCTGATTTTGGATTAGCTAAGTTAACATCTGATAACAACACTCATGTATCTACTCGTGTGATGGGAACTTTCGGgtaagcgtt--ttaccgtatgataagattgttcgtga------cactcaagaaacataacctttgtagactaatctactttgcttctttccacaaacatgtgtag--