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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTAGTGACTGCATCCTTGCTGCCACATTTCATAACATTCTTTAGCGATGGAGAAATTCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTGgtagggtctcagaacatggttctagctgttggttccatctgcaaatttctataacagtgttggattacctgcag

Basic information

species Glycine max
transcript GLYMA01G34270.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21255573|gb|BQ452461.1|BQ452461
EST:     AGAAATTCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTG                         TTTTAAACCTAGCCTTTGCACTGAGCGTCTTAGGATTTCTCATCATGCACA
genomic: AGAAATTCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTGgtagggtctc ... ttacctgcagTTTTAAACCTAGCCTTTGCACTGAGCGTCTTAGGATTTCTCATCATGCACA
EST: gi|192314970|gb|FK010788.1|FK010788
EST:     AGAAATTCCTGGAACACCTGGCTCTCTAGCTACAACTTTTCTTGCTTTTG                         TTTTAAACCTAGCCTTTGCACTGAGCGTCTTAGGATTTCTCATCATGCACA
genomic: AGAAATTCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTGgtagggtctc ... ttacctgcagTTTTAAACCTAGCCTTTGCACTGAGCGTCTTAGGATTTCTCATCATGCACA
EST: gi|13240177|gb|BG359486.1|BG359486
EST:     AGAAATTCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTG                         TTTTAAACCTAGCCTTTGCACTGAGCGTCTTAGGAT
genomic: AGAAATTCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTGgtagggtctc ... ttacctgcagTTTTAAACCTAGCCTTTGCACTGAGCGTCTTAGGAT