1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTATACAGCCAGTGAAGTAGACATTGGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAGgtgatttctcatatcttattgacagtgaacgactgatttgctgattcattttcatgagattattgtgttttcttttgttaaaaaaataagaatcaaatat...
species | Glycine max |
transcript | GLYMA01G01960.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAG ACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCATEST: gi|7686678|gb|AW757256.1|AW757256
genomic: GGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAGgtgatttctc ... gatgccacagACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCAT
EST: GGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAG ACAGGAGGTATTATTCTTAGATGATGAGATGTCCTTCAATGAGGCTATCATEST: gi|22933904|gb|BU551043.1|BU551043
genomic: GGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAGgtgatttctc ... gatgccacagACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCAT
EST: TGTGGAATCCAGAAG ACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCATEST: gi|192310954|gb|FK001591.1|FK001591
genomic: TGTGGAATCCAGAAGgtgatttctc ... gatgccacagACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCAT
EST: GGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAG ACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCAT
genomic: GGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAGgtgatttctc ... gatgccacagACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATACAGCCAGTGAAGTAGACATTGGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAGgtgatttctcatatcttattgacagtgaacgactgatttgctgattcattttcatgagattattgtgttttcttttgttaaaaaaataagaatcaaatat
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