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CATTGATGAGACTGGCATAGATGCTTTGGCAGTGTGTATTGGTAACGTGCATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatacatttctgtttgtattctttatgcttttattggtaaattctttcccaaaaaaacaaaaatgaaaagtccagaccttagctgatttttgtga...
species | Glycine max |
transcript | GLYMA07G11610.1 |
intron # | 36 |
splice site | 5' |
intron type | U2 |
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGCTTTGEST: gi|11687590|gb|BF595266.1|BF595266
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATGCTTTG
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGTEST: gi|16105341|gb|BI893081.1|BI893081
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGT
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGTEST: gi|9984922|gb|BE659030.1|BE659030
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGT
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGTEST: gi|10843359|gb|BF066661.1|BF066661
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGT
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGACTT-GAGCCTGAAGACAGGAATTCTTCTGGTGCTTCATGGEST: gi|6964653|gb|AW433346.1|AW433346
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATG-CTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGG
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGTEST: gi|7640186|gb|AW734493.1|AW734493
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGT
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGCTTTGAGCCTGAAGAAAGGAATGTTTCTGGTGCTTCATGGTEST: gi|37996210|gb|CF807799.1|CF807799
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGT
EST: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAG GAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGT
genomic: ATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatac ... ccatgtttagGAGCTGCATGCTTTGAGCCTGAAGAAAGGAATTTTTCTGGTGCTTCATGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTGATGAGACTGGCATAGATGCTTTGGCAGTGTGTATTGGTAACGTGCATGGAAAGTACCCTGCAAGTGGTCCAAATCTGAGATTTGATCTGCTTAAGgtgataatacatttctgtttgtattctttatgcttttattggtaaattctttcccaaaaaaacaaaaatgaaaagtccagaccttagctgatttttgtga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctttccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaacaaaa