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21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' |
AAATGCAAGTTCTGGATCATCAATAGCATCTGTTCATGGTGCTGTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGgtttgtccagtaataaaatccataccatatgatttgtattggtaattttgaatgcatgtaatgactcagtgaaatccaattgagatattgaaaaaagtta...
species | Glycine max |
transcript | GLYMA18G07950.1 |
intron # | 31 |
splice site | 5' |
intron type | U2 |
EST: GTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAG TTGGTTGCCTGATCATGTTACACTACTTGCTCGCTTCAGTGGGGAGCCATCEST: gi|120528749|gb|EH256883.1|EH256883
genomic: GTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGgtttgtccag ... tttctttcagTTGGTTGCCTGATCATGTTACACTACTTGCTCGCTTCAGTGGGGAGCCATC
EST: GTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAG TTGGTTGCCTGATCATGGTACACTACTTGCTCGCTTCAGTGGGGAGCCATCEST: gi|193411782|gb|FK379883.1|FK379883
genomic: GTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGgtttgtccag ... tttctttcagTTGGTTGCCTGATCATGTTACACTACTTGCTCGCTTCAGTGGGGAGCCATC
EST: GTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAG TTGGTTGCCTGATCATGTTACACTACTTGCTCGEST: gi|193339957|gb|FK306648.1|FK306648
genomic: GTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGgtttgtccag ... tttctttcagTTGGTTGCCTGATCATGTTACACTACTTGCTCG
EST: GTATTATCAGCCCCATATGACATGCCCAG TTGGTTGCCTGATCATGTTACACTACTTGCTCGCTTCAGTGGGGAGCCATC
genomic: GTATTATCAGCCCCATATGACATGCCCAGgtttgtccag ... tttctttcagTTGGTTGCCTGATCATGTTACACTACTTGCTCGCTTCAGTGGGGAGCCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAATGCAAGTTCTGGATCATCAATAGCATCTGTTCATGGTGCTGTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGgtttgtccagtaataaaatccataccatatgatttgtattggtaattttgaatgcatgtaatgactcagtgaaatccaattgagatattgaaaaaagtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgaaaaaa