1 5' 3' | 2 5' 3' | 3 5' 3' |
GAGAAAAATTGCCGATGAATTGGACAGAACCCCTGGAGAGATACTGAAGAAACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAGgtatgattccctatttctgtttattttttattctactgttttcattatagaaggattattataagcaatacttgagatgtaattctatgtctaaaagaac...
species | Glycine max |
transcript | GLYMA20G38460.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAG GTCATAGTGGAAATGTGCTTTTCTGGTAGGTCATTTGCCCACAGTTAGGTCEST: gi|192334350|gb|FK024421.1|FK024421
genomic: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAGgtatgattcc ... ttgtgtgcagGTCATAGTGGAAATGTGCTTTTCTGGTAGGTCATTTGCCCACAGTTAGGTC
EST: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAG GTCATAGTGGAAATGTGTTTTTEST: gi|16105296|gb|BI893036.1|BI893036
genomic: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAGgtatgattcc ... ttgtgtgcagGTCATAGTGGAAATGTGCTTTT
EST: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAG GTCATAGTGGAAATGTGCTTTTCTGGTAGGTCATTTGCCCACAGTTAGGTCEST: gi|254324564|gb|GR833989.1|GR833989
genomic: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAGgtatgattcc ... ttgtgtgcagGTCATAGTGGAAATGTGCTTTTCTGGTAGGTCATTTGCCCACAGTTAGGTC
EST: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAG GTCATAGTGGAAATGTGCTTTTCTGGTAGGTCATTTGCCCACAGTTAGGTC
genomic: AACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAGgtatgattcc ... ttgtgtgcagGTCATAGTGGAAATGTGCTTTTCTGGTAGGTCATTTGCCCACAGTTAGGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAAAAATTGCCGATGAATTGGACAGAACCCCTGGAGAGATACTGAAGAAACTTGAGGAAGTGCGAAATAAGATTATTTAAGAAATGGTAGCCTGAGAGgtatgattccctatttctgtttattttttattctactgttttcattatagaaggattattataagcaatacttgagatgtaattctatgtctaaaagaac
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