1 5' 3' | 2 5' 3' | 3 5' 3' |
GAGAAGGATGCTGGTGGCTTTTACTTGTACCATCTGTGGCCAGCGAACTACAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaactttttttttttgttaatcttaacctccgccatatcacgtgtctcaataattttcttgggctgaatttggaaaccaatcctaaacttgtagtacgc...
species | Glycine max |
transcript | GLYMA20G23970.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTTEST: gi|151406646|gb|EV276461.1|EV276461
genomic: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
EST: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTTEST: gi|209719317|gb|BW679834.1|BW679834
genomic: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
EST: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTTEST: gi|254328089|gb|GR835054.1|GR835054
genomic: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
EST: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTTEST: gi|7796356|gb|AW781753.1|AW781753
genomic: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
EST: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTTEST: gi|192315068|gb|FK010438.1|FK010438
genomic: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
EST: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
genomic: CAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAAGGATGCTGGTGGCTTTTACTTGTACCATCTGTGGCCAGCGAACTACAAGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaactttttttttttgttaatcttaacctccgccatatcacgtgtctcaataattttcttgggctgaatttggaaaccaatcctaaacttgtagtacgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccgcc