1 5' 3' | 2 5' 3' | 3 5' 3' |
AGCATGCATCTTTATTTCCCCTGTGGGATCATTAGAGGAGCTCTTTCCAACTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatctctctctctccctctctctctctctcttttctctcacagtttagagacgtctttttagggatagagaaaccttttttatcatggatgtttt...
species | Glycine max |
transcript | GLYMA19G42850.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTGEST: gi|7284299|gb|AW596893.1|AW596893
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTGEST: gi|31561880|gb|CD487718.1|CD487718
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTGEST: gi|22525870|gb|BU084681.1|BU084681
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
EST: CTTGGGAATTCCTTGTGCAGCTTCTGCGGATATATCCAACCCTCCTGCAT GTTCATTTGGGGTCCGTATAAAAGCTEST: gi|193644534|gb|FK587284.1|FK587284
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCT
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTGEST: gi|308222656|gb|HO760571.1|HO760571
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTGEST: gi|193720851|gb|FK659015.1|FK659015
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
EST: CAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTGEST: gi|192297826|gb|FG988324.1|FG988324
genomic: CAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTTGAAGGGTTCATAGCTGTATTACTEST: gi|24136644|gb|BU927154.1|BU927154
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTT-GAAGGGTTCATAGCTGTATTACT
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTGEST: gi|51335698|gb|CO979564.1|CO979564
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
EST: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCAT GTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
genomic: CTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatct ... cattgagcagGTTCATTTGTGGTCCGTATAAAAGCTTGAAGGGTTCATAGCTGTATTACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCATGCATCTTTATTTCCCCTGTGGGATCATTAGAGGAGCTCTTTCCAACTTGGGAATTCCTTGTGCAGTTTCTGCGGATATATCAAACCTTCCTGCATgtgtgtatctctctctctccctctctctctctctcttttctctcacagtttagagacgtctttttagggatagagaaaccttttttatcatggatgtttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctcac