1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTGCGAAGAAGAAGGAGGTGAAGAAGGAAACTGGCTTAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAGgtattctgagtcgtttaatggtttatgcttgttgttttgacctgatctgtgttcggtcaaagttgctcgttcatccttgaactgatattgtttcactgtatgacaatttcagtagtgtgtgtgttttggttgactttggatttggattaatttggcag
species | Glycine max |
transcript | GLYMA19G40930.4 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAG GTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTATEST: gi|7591393|gb|AW707127.1|AW707127
genomic: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAGgtattctgag ... aatttggcagGTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTAT
EST: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAG GTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTATEST: gi|193444216|gb|FK409738.1|FK409738
genomic: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAGgtattctgag ... aatttggcagGTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTAT
EST: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAG GTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTATEST: gi|193310687|gb|FK274611.1|FK274611
genomic: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAGgtattctgag ... aatttggcagGTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTAT
EST: AGGCGGAGAACTTCGGAGAGTGGTATTCCGAG GTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTATEST: gi|208266921|gb|GE062316.1|GE062316
genomic: AGGCGGAGAACTTCGGAGAGTGGTATTCCGAGgtattctgag ... aatttggcagGTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTAT
EST: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAG GTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTAT
genomic: TAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAGgtattctgag ... aatttggcagGTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCGAAGAAGAAGGAGGTGAAGAAGGAAACTGGCTTAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAGgtattctgagtcgtttaatggtttatgcttgttgttttgacctgatctgtgttcggtcaaagttgctcgttcatccttgaactgatattgtttcactgtatgacaatttcagtagtgtgtgtgttttggttgactttggatttggattaatttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA