1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGGCATGTTTAAGGGAATCTACCACGGCAAGCAATGTCACGTCTCGGATATTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcccctgccctgtttctcaaccaacctttcaaatctgtaatgccaagttttattttcttatgagtgatagttctgctttaatcattaattaaa...
species | Glycine max |
transcript | GLYMA19G38780.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCAAATTATT GTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAAEST: gi|192332143|gb|FK026381.1|FK026381
genomic: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcc ... tgcgttgcagGTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAA
EST: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATT GTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAAEST: gi|298194140|gb|HO040788.1|HO040788
genomic: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcc ... tgcgttgcagGTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAA
EST: TTGCAACTGCTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATT GTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAAEST: gi|298166829|gb|HO010268.1|HO010268
genomic: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcc ... tgcgttgcagGTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAA
EST: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATT GTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAAEST: gi|120492279|gb|EH220446.1|EH220446
genomic: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcc ... tgcgttgcagGTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAA
EST: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATT GTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAAEST: gi|192323850|gb|FK015631.1|FK015631
genomic: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcc ... tgcgttgcagGTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAA
EST: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATT GTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAA
genomic: TTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcc ... tgcgttgcagGTAACTGGTGGGTCTCTAGAAGAATCAAGGGAGGCACTTGCCATTGCGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGCATGTTTAAGGGAATCTACCACGGCAAGCAATGTCACGTCTCGGATATTGCAACTGTTTTGAACAGAGCTTGGGCTGCCGGCGTCACCCGAATTATTgtaatgtgcccctgccctgtttctcaaccaacctttcaaatctgtaatgccaagttttattttcttatgagtgatagttctgctttaatcattaattaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctgcc