1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTCCGGACCTTGAGACTGTCGACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAGgtttgttccttttatgtaaatttatatttatatttcaattcactggtttttaaggaatagagtcatttcttgttatgctccacatattcatgtgcatgta...
species | Glycine max |
transcript | GLYMA19G38010.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAG CCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTCEST: gi|15285042|gb|BI468933.1|BI468933
genomic: ACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAGgtttgttcct ... atctttgtagCCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTC
EST: ACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAG CCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTCEST: gi|51341683|gb|CO983000.1|CO983000
genomic: ACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAGgtttgttcct ... atctttgtagCCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTC
EST: ACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAG CCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTC
genomic: ACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAGgtttgttcct ... atctttgtagCCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCCGGACCTTGAGACTGTCGACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAGgtttgttccttttatgtaaatttatatttatatttcaattcactggtttttaaggaatagagtcatttcttgttatgctccacatattcatgtgcatgta
- - - - - - - - - - - - - - - - - GAGCAG