1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTGgtaatgtctcagcattcctgcataacatttttgctttgagtcttgctaactagtgcccttaggacattggttaaggaaatagaaggagaaaatatttatt...
species | Glycine max |
transcript | GLYMA19G35630.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTG GTCATTTCCACTTGACAAACCTGCTTCTTGACAAAATGCAACAAACTGCAAEST: gi|7029898|gb|AW459681.1|AW459681
genomic: CAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTGgtaatgtctc ... cacttttcagGTCATTTCCACTTGACAAACCTGCTTCTTGACAAAATGCAACAAACTGCAA
EST: CAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTG GTCATTTCCACTTGACAAACCTGCTTCTTGACAAAATGCAACAAACTGCAAEST: gi|5605831|gb|AI899929.1|AI899929
genomic: CAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTGgtaatgtctc ... cacttttcagGTCATTTCCACTTGACAAACCTGCTTCTTGACAAAATGCAACAAACTGCAA
EST: CAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTG GTCATTTCCACTTGACAAACCTGCTTCTTGACAAAATGCAACAAACTGCAA
genomic: CAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTGgtaatgtctc ... cacttttcagGTCATTTCCACTTGACAAACCTGCTTCTTGACAAAATGCAACAAACTGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTGgtaatgtctcagcattcctgcataacatttttgctttgagtcttgctaactagtgcccttaggacattggttaaggaaatagaaggagaaaatatttatt
- - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaataga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggagaaaa