1 5' 3' | 2 5' 3' | 3 5' 3' |
GATGGATTTGATGATATCTATGGAAGTGCATCTAATAGTAAAGGTGTCACTCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatcatgcaatactctcaaacctgcactacttcagaacctgttgaatttttaatgtgtttcttttttatttgtctgtgtagtggaaagggggagg...
species | Glycine max |
transcript | GLYMA19G35620.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCEST: gi|254314740|gb|GR829733.1|GR829733
genomic: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
EST: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCEST: gi|193368278|gb|FK334308.1|FK334308
genomic: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
EST: AGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCEST: gi|6072009|gb|AW101456.1|AW101456
genomic: AGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
EST: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCEST: gi|254317774|gb|GR826758.1|GR826758
genomic: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
EST: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCEST: gi|193656513|gb|FK605001.1|FK605001
genomic: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
EST: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCEST: gi|4395713|gb|AI494710.1|AI494710
genomic: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
EST: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCEST: gi|13252822|gb|BG363725.1|BG363725
genomic: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
EST: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAG GTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
genomic: TCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatca ... cttgaaccagGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGATTTGATGATATCTATGGAAGTGCATCTAATAGTAAAGGTGTCACTCATAATGACAAGTCAGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGgtttgtatcatgcaatactctcaaacctgcactacttcagaacctgttgaatttttaatgtgtttcttttttatttgtctgtgtagtggaaagggggagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gggggag