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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtatttctatatgtgttaaaacttaaaaagccatttacattagcttagcggaatatcattgagaagcattgctgtgtgtgacactttatttagatt...

Basic information

species Glycine max
transcript GLYMA19G29180.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209725147|gb|BW663074.1|BW663074
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213591543|gb|DB955779.1|DB955779
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTT
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTT
EST: gi|213612078|gb|DB956843.1|DB956843
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209701971|gb|BW661357.1|BW661357
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213597966|gb|DB958347.1|DB958347
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209712621|gb|BW684171.1|BW684171
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213593836|gb|DB957956.1|DB957956
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213611715|gb|DB960643.1|DB960643
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209707702|gb|BW676681.1|BW676681
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTCACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213592009|gb|DB963916.1|DB963916
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209715176|gb|BW665653.1|BW665653
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTAC
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTAC
EST: gi|213610397|gb|DB958854.1|DB958854
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209728077|gb|BW655310.1|BW655310
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213617554|gb|DB969266.1|DB969266
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|15814469|gb|BI786744.1|BI786744
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213607167|gb|DB967016.1|DB967016
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGNAGTGGATACCATTCCGGTACTCGTTGG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGG
EST: gi|120532893|gb|EH261026.1|EH261026
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGNTTACATACTTGTT
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTG-TTACATACTTGTT
EST: gi|213614317|gb|DB958621.1|DB958621
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213593677|gb|DB971699.1|DB971699
EST:     TCACCTATGCTTCTCACAAGGCTGTTGACGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCC
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCC
EST: gi|209721381|gb|BW654577.1|BW654577
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213591482|gb|DB973859.1|DB973859
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213615167|gb|DB964975.1|DB964975
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213615444|gb|DB965516.1|DB965516
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209717729|gb|BW679734.1|BW679734
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213619477|gb|DB963415.1|DB963415
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209728871|gb|BW666868.1|BW666868
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|16277995|gb|BI942671.1|BI942671
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGGTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209700857|gb|BW661274.1|BW661274
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213611870|gb|DB958908.1|DB958908
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213597723|gb|DB964171.1|DB964171
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGT
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGT
EST: gi|209698071|gb|BW680392.1|BW680392
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACT
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACT
EST: gi|213597232|gb|DB962478.1|DB962478
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209699646|gb|BW652057.1|BW652057
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCC
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCC
EST: gi|213599870|gb|DB966414.1|DB966414
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213595958|gb|DB955994.1|DB955994
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209704950|gb|BW661727.1|BW661727
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209719133|gb|BW674895.1|BW674895
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213611013|gb|DB970940.1|DB970940
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209712730|gb|BW681584.1|BW681584
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213603676|gb|DB956255.1|DB956255
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209710405|gb|BW681304.1|BW681304
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209710586|gb|BW661992.1|BW661992
EST:     ACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGGAGGC-AAGGGCG                         CT-GGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTT
genomic: ACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGG-AGGCCAAGG-CGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTT
EST: gi|213620379|gb|DB957276.1|DB957276
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACNAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213610607|gb|DB960632.1|DB960632
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACNAGGAGGCCAAGGCG                         CTTGGAGTGGATACCAT
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCAT
EST: gi|213595542|gb|DB968506.1|DB968506
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213619487|gb|DB963425.1|DB963425
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTG
EST: gi|213589536|gb|DB973207.1|DB973207
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209716337|gb|BW674433.1|BW674433
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209708297|gb|BW683887.1|BW683887
EST:     TCACCTATGCTTCTCACAGGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213588636|gb|DB957549.1|DB957549
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACNAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213607938|gb|DB959193.1|DB959193
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCATACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|19934576|gb|BQ079606.1|BQ079606
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213587942|gb|DB971431.1|DB971431
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACGAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|213603164|gb|DB960441.1|DB960441
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
EST: gi|209698420|gb|BW667217.1|BW667217
EST:     TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCG                         CTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG
genomic: TCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtattt ... tgtcttgcagCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGgtatgtatttctatatgtgttaaaacttaaaaagccatttacattagcttagcggaatatcattgagaagcattgctgtgtgtgacactttatttagatt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
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