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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCTGTTGAAGATAACATTCTCATCAGTTTAGAGAAACCAAAATGGCTTATTGCAATGGCTAACATGTTTGTTGTGATCCATGTTATTGGTAGTTATCAGgtgaaattcagtttctcttactcttatctaaaaccttctaattttaacattggttcaaaaaactaaagtgctctagagtaactcttttttttgttgatgtag

Basic information

species Glycine max
transcript GLYMA19G24520.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G24520.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv14s0171g00400.t01 (Vitis vinifera), 5'ss of exon 4
TTCTGTTGAAGATAACATTCTCATCAGTTTAGAGAAACCAAAATGGCTTATTGCAATGGCTAACATGTTTGTTGTGATCCATGTTATTGGTAGTTATCAGgtgaaattcagtttctcttactcttatctaaaaccttctaattttaacattggttcaaaaaactaaagtgctctagagtaactcttttttttgttgatgtag
| | ||   ||| |||||| | |||   || ||||| ||   |||||||||||| ||||| |||||||| || || |||||||||||||| || |||||||||   | |     | |     || ||  |      || ||| ||  |      |||      |   ||||  |   | |                      
TGCGGTGTCAGACAACATTTTGATCTCATTGGAGAACCCTGCATGGCTTATTGCTATGGCCAACATGTTCGTGGTCATCCATGTTATTGGAAGCTATCAGgtgctgtcccaaaccccc----ctaattcagtcgtctcaaatctttcctccaactcatggt-tttgtgtgccttcatgcag---------------------