1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AAAGCTGCTGCTGGACTTAGACGCATTAATCTTGATGGTCTTCGATGGAGGGTTTTTGATGCAAAGGGCCAGgtgagtctgcagcttttttcttgatccttctcttgaaagctaacatagagtgactatgtgcccatgatatgatgtttctgatgtcaagttaaagcagttt...
species | Glycine max |
transcript | GLYMA19G22420.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCATTAATCTTGATGGTCTTCGATGGAGGGTTTTTGATGCAAAGGGCCAG GTTCTTGGGAGGTTAGCATCTCAAATAGCTACTGTAGTTCAAGGAAAGGATEST: gi|192323120|gb|FK015246.1|FK015246
genomic: GCATTAATCTTGATGGTCTTCGATGGAGGGTTTTTGATGCAAAGGGCCAGgtgagtctgc ... ttttatatagGTTCTTGGGAGGTTAGCATCTCAAATAGCTACTGTAGTTCAAGGAAAGGAT
EST: GATGCAAAGGGCCAG GTTCTTGGGAGGTTAGCATCTCAAATAGCTACTGTAGTTCAAGGAAAGGAT
genomic: GATGCAAAGGGCCAGgtgagtctgc ... ttttatatagGTTCTTGGGAGGTTAGCATCTCAAATAGCTACTGTAGTTCAAGGAAAGGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGCTGCTGCTGGACTTAGACGCATTAATCTTGATGGTCTTCGATGGAGGGTTTTTGATGCAAAGGGCCAGgtgagtctgcagcttttttcttgatccttctcttgaaagctaacatagagtgactatgtgcccatgatatgatgtttctgatgtcaagttaaagcagttt
- - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttctc