1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTTTCAGTAAGCTACTTTTTGGCACTATGCACATCAAGTCATATGATTGGGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatacttccctatttttgtaccctatccatgtactattcactactacttagagcatgtttggataacgttgcactgtttccaaaagtaatttttc...
species | Glycine max |
transcript | GLYMA19G02430.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAA ACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCAEST: gi|254341534|gb|GR852671.1|GR852671
genomic: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatac ... aattatgcagACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
EST: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAA ACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCAEST: gi|192328382|gb|FK020093.1|FK020093
genomic: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatac ... aattatgcagACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
EST: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAA ACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCAEST: gi|298194116|gb|HO040764.1|HO040764
genomic: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatac ... aattatgcagACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
EST: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAA ACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCAEST: gi|6913433|gb|AW394963.1|AW394963
genomic: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatac ... aattatgcagACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
EST: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAA ACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCAEST: gi|162286139|gb|FC456641.1|FC456641
genomic: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatac ... aattatgcagACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
EST: GGTCGTTGACTTGCCTCCTGAATCTCCTACAACTATCAAACCATCAGAAA ATCAAGGTCCTGAGATGAGGTTGGCCAAAGTTAAGGTTGATGCTGATTTCAEST: gi|6481438|gb|AW200709.1|AW200709
genomic: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatac ... aattatgcagACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
EST: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAA ACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
genomic: GGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatac ... aattatgcagACCAAGGTCCTGAGATGAGGTTAGCCAAAGTTAAGGTTGATGCTGATTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTCAGTAAGCTACTTTTTGGCACTATGCACATCAAGTCATATGATTGGGTCGTTGACTCGCCTCCTGAATCTCCTACAACTCTCAAACCATCAGAAAgtgagtatacttccctatttttgtaccctatccatgtactattcactactacttagagcatgtttggataacgttgcactgtttccaaaagtaatttttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctatcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaagtaa