1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AAATCTGGTCAAATTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAagtatgctttgaatctgtcttatttctaatcatgtcttcgcttctgcttgtttatatctgcagtccttgtttttgcagtaaatttagtgaattcattggc...
species | Glycine max |
transcript | GLYMA18G49060.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGA AAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTEST: gi|9820922|gb|BE556432.1|BE556432
genomic: TGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAagtatgcttt ... gaattgtgcaGAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGT
EST: TGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGA AAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGT
genomic: TGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAagtatgcttt ... gaattgtgcaGAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAATCTGGTCAAATTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAagtatgctttgaatctgtcttatttctaatcatgtcttcgcttctgcttgtttatatctgcagtccttgtttttgcagtaaatttagtgaattcattggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA