Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCACAAAGAGCTTGAAATGAGTGTCACAGAAACACCAAAGAAAACCGGTGCCCCCCAAATTGTTAAGTTGGACAAGGCATTGAAATTGgtaagcatttttttacccctcttgctgtgggcgtagggtagggattatgtattttgtggttgtcaaatggatggcaaattatttgtggtattgatgtgca...

Basic information

species Glycine max
transcript GLYMA18G46720.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207720239|gb|GD701226.1|GD701226
EST:     AAAACCGGTG-CCCCCAAATTGTTAAGTTGGACAAGGCATTGAAATTG                         GCAGAGTTATGGGTAAATAATATGAGCAAAGATGCAGATGATGATAGAACA
genomic: AAAACCGGTGCCCCCCAAATTGTTAAGTTGGACAAGGCATTGAAATTGgtaagcattt ... tgattggcagGCAGAGTTATGGGTAAATAATATGAGCAAAGATGCAGATGATGATAGAACA
EST: gi|193533324|gb|FK491086.1|FK491086
EST:     AGAAAACCGGTGCCCCCCAAATTGTTAAGTTGGACAAGGCATTGAAATTG                         GCAGAGTTATGGGTAAATAATATGAGCAAAGATGCAGATGATGATAGAACA
genomic: AGAAAACCGGTGCCCCCCAAATTGTTAAGTTGGACAAGGCATTGAAATTGgtaagcattt ... tgattggcagGCAGAGTTATGGGTAAATAATATGAGCAAAGATGCAGATGATGATAGAACA
EST: gi|151405453|gb|EV275267.1|EV275267
EST:     AGAAAACCGGTGCCCCCCAAATTGTTAAGTTGGACAAGGCATTGAAATTG                         GCAGAGTTATGGGTAAATAATATGAGCAAAGATGCAGATGATGATAGAACA
genomic: AGAAAACCGGTGCCCCCCAAATTGTTAAGTTGGACAAGGCATTGAAATTGgtaagcattt ... tgattggcagGCAGAGTTATGGGTAAATAATATGAGCAAAGATGCAGATGATGATAGAACA