1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GATCATAATGTGGATTTTGCTGCTGGGAATGTGAAACTTATTACCACCAAAGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGtaagttttccctcttttttactctgtaggacagtaaaattaaagacctatttccattttgttgtgtggtttggatgaaccactaataccttaccatgact...
species | Glycine max |
transcript | GLYMA18G44840.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTG TGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCACEST: gi|193390126|gb|FK355402.1|FK355402
genomic: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGtaagttttcc ... cttcaacaggTGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCAC
EST: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTG TGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCACEST: gi|31463850|gb|CD405878.1|CD405878
genomic: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGtaagttttcc ... cttcaacaggTGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCAC
EST: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTG TGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCACEST: gi|8286114|gb|BE023673.1|BE023673
genomic: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGtaagttttcc ... cttcaacaggTGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCAC
EST: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTG TGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCAC
genomic: AGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGtaagttttcc ... cttcaacaggTGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCATAATGTGGATTTTGCTGCTGGGAATGTGAAACTTATTACCACCAAAGAAGCGTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGtaagttttccctcttttttactctgtaggacagtaaaattaaagacctatttccattttgttgtgtggtttggatgaaccactaataccttaccatgact
- - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttccctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaattaaa