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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATCTGTATACGCATCTGACTCCTATTCAGCGGGTCAACATCGCACGGCACCCTAACAGGCCAACTTTCCTTGATCATGTCTTTAACATAACTGAAAAGgtcttctaagtattatttttgttttttacttcaatattctagttatttcattttcataatacatattatagttgcttttttgttattgaaccactttaaccgaatttccatgtttcctcgtgtttcag

Basic information

species Glycine max
transcript GLYMA18G42300.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA18G42300.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv08s0007g01750.t01 (Vitis vinifera), 5'ss of exon 4
GGATCTGTATACGCATCTGACTCCTATTCAGCGGGTCAACATCGCACGGCACCCTAACAGGCCAACTTTCCTTGATCATGTCTTTAACATAACTGAAAAGgtcttctaagtattatttttgttttttacttcaatattctagttatttcattttcataatacatattatagttgcttttttgttattg---------aaccactttaac-cgaatttccatgtttcctcgtgtttcag-
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AGATCTATATACACATCTGACTCCTATACAGCGTGTGGGTATTGCACGGCACCCTAACAGGCCGACTTTTCTCGATCACGTGTTTAACATTACTGACAAGgtatgatgccaaccagctg-actagattttcaggtttttcagtgaatctgcattacaagaagatatctaaattctgtgcttatgggcgctaaaaggaaataattttaatatgttctttcatatatccccatatttccag